1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s4_321V6

Pp1s4_321V6


Description : psi reaction center subunit ii


Gene families : OG_42_0006268 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006268_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s4_321V6
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
A4A49_07455 No alias photosystem i reaction center subunit ii, chloroplastic 0.22 Orthogroups_2024-Update
A4A49_20575 No alias photosystem i reaction center subunit ii, chloroplastic 0.09 Orthogroups_2024-Update
At1g03130 No alias Photosystem I reaction center subunit II-2,... 0.09 Orthogroups_2024-Update
At4g02770 No alias Photosystem I reaction center subunit II-1,... 0.08 Orthogroups_2024-Update
Bradi1g04700 No alias photosystem I subunit D-2 0.12 Orthogroups_2024-Update
Brara.I00185.1 No alias component *(PsaD) of PS-I complex 0.17 Orthogroups_2024-Update
Cre05.g238332 No alias photosystem I subunit D-2 0.14 Orthogroups_2024-Update
GRMZM2G024150 No alias photosystem I subunit D-2 0.05 Orthogroups_2024-Update
Glyma.10G249000 No alias photosystem I subunit D-2 0.18 Orthogroups_2024-Update
Glyma.20G144700 No alias photosystem I subunit D-2 0.09 Orthogroups_2024-Update
HORVU5Hr1G109710.1 No alias component *(PsaD) of PS-I complex 0.09 Orthogroups_2024-Update
Kfl00193_0150 kfl00193_0150_v1.1 (p12353|psad_spiol : 246.0) Photosystem I reaction... 0.12 Orthogroups_2024-Update
MA_9169733g0010 No alias (p32869|psad_cucsa : 194.0) Photosystem I reaction... 0.08 Orthogroups_2024-Update
Mp5g04200.1 No alias component PsaD of PS-I complex 0.14 Orthogroups_2024-Update
Potri.008G151600 No alias photosystem I subunit D-2 0.03 Orthogroups_2024-Update
Seita.9G045100.1 No alias component *(PsaD) of PS-I complex 0.08 Orthogroups_2024-Update
Sobic.001G046900.1 No alias component *(PsaD) of PS-I complex 0.15 Orthogroups_2024-Update
Solyc06g054260 No alias photosystem 1 reaction center protein subunit 2 0.16 Orthogroups_2024-Update
Sopen06g019380 No alias PsaD 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR003685 PsaD 78 208
No external refs found!