1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s50_125V6

Pp1s50_125V6


Description : squamosa promoter-binding-like protein 11


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s50_125V6
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Brara.E00270.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G199000 No alias squamosa promoter binding protein-like 3 0.03 Orthogroups_2024-Update
Glyma.12G226000 No alias squamosa promoter-binding protein-like 12 0.02 Orthogroups_2024-Update
PSME_00053503-RA No alias (at1g02065 : 156.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
Potri.014G057800 No alias squamosa promoter binding protein-like 10 0.03 Orthogroups_2024-Update
Sobic.004G036900.2 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G058900.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc10g078700 No alias Squamosa promoter binding protein 15 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 268 341
No external refs found!