Pp1s54_166V6

Description : photosystem ii 10 kda polypeptide

Gene families : OG_42_0002845 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002845_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s54_166V6
Cluster	HCCA clusters: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
A4A49_20557	No alias	photosystem ii 10 kda polypeptide, chloroplastic	0.03	Orthogroups_2024-Update
Cre06.g261000	No alias	photosystem II subunit R	0.04	Orthogroups_2024-Update
Glyma.08G173700	No alias	photosystem II subunit R	0.03	Orthogroups_2024-Update
Glyma.15G253700	No alias	photosystem II subunit R	0.04	Orthogroups_2024-Update
Kfl00098_0060	kfl00098_0060_v1.1	(q40070\|psbr_horvu : 102.0) Photosystem II 10 kDa...	0.02	Orthogroups_2024-Update
LOC_Os07g05360	No alias	photosystem II 10 kDa polypeptide, chloroplast...	0.02	Orthogroups_2024-Update
MA_282g0010	No alias	(p06183\|psbr_soltu : 160.0) Photosystem II 10 kDa...	0.02	Orthogroups_2024-Update
Pp1s41_264V6	No alias	photosystem ii 10 kda polypeptide	0.02	Orthogroups_2024-Update
Seita.6G032200.1	No alias	component *(PsbR) of PS-II complex	0.02	Orthogroups_2024-Update
Solyc07g066310	No alias	Photosystem II 10 kDa polypeptide family protein (AHRD...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	InterProScan predictions
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0016020	membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042651	thylakoid membrane	IEA	InterProScan predictions
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006814	PSII_PsbR	51	145

External Links

No external refs found!