1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s55_224V6

Pp1s55_224V6


Description : T24C20.110; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0000240 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s55_224V6
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
A4A49_32922 No alias hypothetical protein 0.02 Orthogroups_2024-Update
A4A49_41394 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g70550 No alias Protein of Unknown Function (DUF239) [Source:TAIR;Acc:AT1G70550] 0.02 Orthogroups_2024-Update
At2g44210 No alias AT2G44210 protein [Source:UniProtKB/TrEMBL;Acc:B9DGK6] 0.03 Orthogroups_2024-Update
Bradi2g04360 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
Brara.J00689.1 No alias regulatory protein *(LOTR) involved in Casparian strip formation 0.02 Orthogroups_2024-Update
GRMZM2G129947 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
Glyma.10G168300 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
LOC_Os01g37000 No alias carboxyl-terminal peptidase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G188000 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
Sobic.007G162000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004314 Neprosin 182 421
IPR025521 Neprosin_propep 69 136
No external refs found!