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  5. Pp1s55_284V6

Pp1s55_284V6


Description : mikc* mads-box transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s55_284V6
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
A4A49_35435 No alias agamous-like mads-box protein agl8 0.03 Orthogroups_2024-Update
Bradi2g31084 No alias K-box region and MADS-box transcription factor family protein 0.05 Orthogroups_2024-Update
Brara.C00925.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.02 Orthogroups_2024-Update
Brara.J01588.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.02 Orthogroups_2024-Update
Glyma.02G185500 No alias AGAMOUS-like 18 0.03 Orthogroups_2024-Update
Solyc04g076680 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g037750 No alias K-box region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001906 cell killing IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0019835 cytolysis IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0031640 killing of cells of other organism IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0035821 modification of morphology or physiology of other organism IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044179 hemolysis in other organism IEP Predicted GO
BP GO:0044364 disruption of cells of other organism IEP Predicted GO
BP GO:0044419 interspecies interaction between organisms IEP Predicted GO
BP GO:0044764 multi-organism cellular process IEP Predicted GO
CC GO:0046930 pore complex IEP Predicted GO
BP GO:0046931 pore complex assembly IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051715 cytolysis in other organism IEP Predicted GO
BP GO:0051801 cytolysis in other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0051818 disruption of cells of other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0051883 killing of cells in other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0052331 hemolysis in other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!