1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s55_7V6

Pp1s55_7V6


Description : F12A21.30; leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana]


Gene families : OG_42_0000973 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s55_7V6
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Bradi1g44967 No alias DegP protease 9 0.03 Orthogroups_2024-Update
GRMZM2G117615 No alias DegP protease 10 0.02 Orthogroups_2024-Update
Glyma.10G021800 No alias DEGP protease 2 0.02 Orthogroups_2024-Update
HORVU1Hr1G064600.1 No alias protease *(Deg) 0.03 Orthogroups_2024-Update
Seita.3G039500.1 No alias protease *(Deg) 0.02 Orthogroups_2024-Update
Seita.3G240200.1 No alias protease *(Deg) 0.02 Orthogroups_2024-Update
Sobic.009G042200.1 No alias protease *(Deg) 0.02 Orthogroups_2024-Update
Sobic.009G139200.1 No alias protease *(Deg) 0.07 Orthogroups_2024-Update
Sopen11g004630 No alias Trypsin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001478 PDZ 336 422
No external refs found!