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  5. Pp1s57_228V6

Pp1s57_228V6


Description : unknown [Picea sitchensis]


Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s57_228V6
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Brara.B00202.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B00219.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.04 Orthogroups_2024-Update
Brara.B03486.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.02 Orthogroups_2024-Update
Glyma.17G016100 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.03 Orthogroups_2024-Update
MA_10143614g0010 No alias (at5g19160 : 331.0) Encodes a member of the TBL... 0.02 Orthogroups_2024-Update
MA_2962g0010 No alias (at3g62390 : 481.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
Pp1s309_78V6 No alias af361591_1 at5g06230 mbl20_11 0.04 Orthogroups_2024-Update
Solyc10g080550 No alias Protein trichome birefringence (AHRD V3.3 *** TBR_ARATH) 0.03 Orthogroups_2024-Update
Sopen01g031190 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.02 Orthogroups_2024-Update
Sopen05g001120 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update
Sopen07g003020 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update
Sopen10g031090 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 189 241
IPR026057 PC-Esterase 242 531
No external refs found!