1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s58_47V6

Pp1s58_47V6


Description : 26s proteasome non-atpase regulatory subunit 6


Gene families : OG_42_0003888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003888_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s58_47V6
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
146093 No alias 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.02 Orthogroups_2024-Update
Cre13.g581450 No alias 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.04 Orthogroups_2024-Update
Glyma.17G127100 No alias 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.02 Orthogroups_2024-Update
PSME_00005592-RA No alias (q8w425|psmd6_orysa : 539.0) 26S proteasome non-ATPase... 0.02 Orthogroups_2024-Update
Seita.7G143500.1 No alias regulatory component *(RPN7) of 26S proteasome 0.04 Orthogroups_2024-Update
evm.model.tig00000615.75 No alias (at4g24820 : 445.0) 26S proteasome, regulatory subunit... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000717 PCI_dom 252 354
IPR019585 Rpn7/CSN1 63 236
No external refs found!