1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s58_94V6

Pp1s58_94V6


Description : 40s ribosomal protein s29


Gene families : OG_42_0002354 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002354_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s58_94V6
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
171412 No alias Ribosomal protein S14p/S29e family protein 0.12 Orthogroups_2024-Update
At3g44010 No alias Ribosomal protein S14p/S29e family protein... 0.06 Orthogroups_2024-Update
At4g33865 No alias 40S ribosomal protein S29... 0.03 Orthogroups_2024-Update
Brara.A00423.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.H01243.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Cre08.g358556 No alias Ribosomal protein S14p/S29e family protein 0.27 Orthogroups_2024-Update
HORVU4Hr1G037800.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
HORVU5Hr1G098740.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
LOC_Os11g41610 No alias 40S ribosomal protein S29, putative, expressed 0.03 Orthogroups_2024-Update
MA_10436379g0010 No alias (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... 0.02 Orthogroups_2024-Update
MA_336247g0010 No alias (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... 0.03 Orthogroups_2024-Update
Mp5g15120.1 No alias component RPS29 of SSU proteome 0.03 Orthogroups_2024-Update
Mp8g03910.1 No alias component RPS29 of SSU proteome 0.03 Orthogroups_2024-Update
PSME_00033957-RA No alias (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... 0.14 Orthogroups_2024-Update
PSME_00037160-RA No alias (at4g33865 : 113.0) Ribosomal protein S14p/S29e family... 0.11 Orthogroups_2024-Update
Potri.009G090000 No alias Ribosomal protein S14p/S29e family protein 0.08 Orthogroups_2024-Update
Potri.014G017701 No alias Ribosomal protein S14p/S29e family protein 0.03 Orthogroups_2024-Update
Sobic.008G108601.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.17 Orthogroups_2024-Update
Solyc06g073430 No alias Ribosomal protein S3 (AHRD V3.3 --* A0A0K1ZDA3_9SOLA) 0.17 Orthogroups_2024-Update
Solyc11g020890 No alias 40S ribosomal S29-like protein (AHRD V3.3 *** A0A0B0MKW3_GOSAR) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0030150 protein import into mitochondrial matrix IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0065002 intracellular protein transmembrane transport IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0070585 protein localization to mitochondrion IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071806 protein transmembrane transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098799 outer mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 7 56
No external refs found!