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  5. Pp1s59_133V6

Pp1s59_133V6


Description : 40s ribosomal protein sa


Gene families : OG_42_0001668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s59_133V6
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
36118 No alias 40s ribosomal protein SA 0.04 Orthogroups_2024-Update
Bradi1g20880 No alias 40s ribosomal protein SA B 0.02 Orthogroups_2024-Update
Brara.B02024.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Brara.D01465.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Brara.G03124.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
GRMZM2G126821 No alias 40s ribosomal protein SA B 0.02 Orthogroups_2024-Update
Glyma.15G267100 No alias 40s ribosomal protein SA B 0.03 Orthogroups_2024-Update
Glyma.16G012200 No alias 40s ribosomal protein SA B 0.04 Orthogroups_2024-Update
HORVU2Hr1G030880.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
HORVU4Hr1G077240.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
PSME_00007616-RA No alias (o22518|rssa_soybn : 384.0) 40S ribosomal protein SA... 0.03 Orthogroups_2024-Update
Seita.9G371600.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.002G374900.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.005G229300.1 No alias component *(uS2) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Solyc06g072120 No alias 40S ribosomal protein SA (AHRD V3.3 *** K4C8T4_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 9 102
IPR001865 Ribosomal_S2 106 173
No external refs found!