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  5. Pp1s59_42V6

Pp1s59_42V6


Description : atp-binding cassette


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s59_42V6
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
101338 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
417266 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
429390 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
441722 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
96758 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
A4A49_10346 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_20840 No alias abc transporter g family member 36 0.02 Orthogroups_2024-Update
A4A49_24419 No alias pleiotropic drug resistance protein 3 0.02 Orthogroups_2024-Update
Cre04.g224500 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
Cre16.g648700 No alias pleiotropic drug resistance 5 0.01 Orthogroups_2024-Update
Glyma.03G168101 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.04 Orthogroups_2024-Update
Glyma.10G203000 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.17G206300 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
HORVU4Hr1G081040.4 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
HORVU7Hr1G092510.2 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
MA_105476g0010 No alias (q2pcf1|pdr2_nicpl : 1910.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
MA_135152g0010 No alias (q5z9s8|pdr12_orysa : 1938.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
Mp2g21800.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00002220-RA No alias (q5z9s8|pdr12_orysa : 1203.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00006871-RA No alias (q5z9s8|pdr12_orysa : 1238.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00007342-RA No alias (q5z9s8|pdr12_orysa : 477.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00019551-RA No alias (q76cu2|pdr1_tobac : 1217.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Potri.015G006000 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Pp1s170_10V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Sobic.003G215600.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc05g055330 No alias Drug resistance transporter-like ABC domain protein... 0.03 Orthogroups_2024-Update
Solyc11g007290 No alias No description available 0.03 Orthogroups_2024-Update
evm.model.tig00000057.108 No alias (at3g16340 : 255.0) pleiotropic drug resistance 1... 0.02 Orthogroups_2024-Update
evm.model.tig00000270.11 No alias (q7fmw4|pdr15_orysa : 250.0) Pleiotropic drug resistance... 0.01 Orthogroups_2024-Update
evm.model.tig00021489.3 No alias (at3g21090 : 172.0) ABC-2 type transporter family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1217 1430
IPR013525 ABC_2_trans 533 744
IPR003439 ABC_transporter-like 197 379
IPR003439 ABC_transporter-like 919 1071
IPR013581 PDR_assoc 750 812
IPR029481 ABC_trans_N 123 171
No external refs found!