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  5. Pp1s62_161V6

Pp1s62_161V6


Description : chaperone clpb expressed


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s62_161V6
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
170696 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
174539 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Brara.I04445.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.04 Orthogroups_2024-Update
Brara.J01953.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.03 Orthogroups_2024-Update
HORVU5Hr1G081860.4 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.02 Orthogroups_2024-Update
HORVU6Hr1G028690.3 No alias organellar chaperone *(Clp-p/Clp-m) 0.02 Orthogroups_2024-Update
PSME_00000477-RA No alias (q6f2y7|hs101_orysa : 1387.0) Heat shock protein 101 -... 0.02 Orthogroups_2024-Update
PSME_00014106-RA No alias (at5g15450 : 850.0) Encodes a chloroplast-targeted... 0.03 Orthogroups_2024-Update
Pp1s27_248V6 No alias atp-dependent clp protease 0.03 Orthogroups_2024-Update
Pp1s300_55V6 No alias heat shock protein 101 0.03 Orthogroups_2024-Update
Seita.5G315500.1 No alias cytosolic chaperone *(Hsp101) 0.03 Orthogroups_2024-Update
Sobic.009G201500.1 No alias cytosolic chaperone *(Hsp101) 0.02 Orthogroups_2024-Update
Sopen06g006060 No alias AAA domain (Cdc48 subfamily) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 880 959
IPR003959 ATPase_AAA_core 306 438
IPR004176 Clp_N 122 171
IPR004176 Clp_N 201 248
IPR003959 ATPase_AAA_core 703 873
No external refs found!