Pp1s68_242V6

Description : nucleic acid binding protein

Gene families : OG_42_0000701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000701_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s68_242V6
Cluster	HCCA clusters: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi2g57220	No alias	RNA-binding KH domain-containing protein	0.01	Orthogroups_2024-Update
Glyma.04G111900	No alias	RNA-binding KH domain-containing protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005777	peroxisome	IEP	Predicted GO
CC	GO:0042579	microbody	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032377	STAR_dimer	31	64
IPR004088	KH_dom_type_1	130	174

External Links

No external refs found!