Pp1s69_113V6

Description : zinc finger

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s69_113V6
Cluster	HCCA clusters: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
89924	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
A4A49_38012	No alias	dof zinc finger protein dof5.1	0.03	Orthogroups_2024-Update
At1g26790	No alias	Dof-type zinc finger DNA-binding family protein...	0.03	Orthogroups_2024-Update
At1g29160	No alias	Uncharacterized protein At1g29160 (Fragment)...	0.02	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.02	Orthogroups_2024-Update
At4g38000	No alias	DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8]	0.02	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.02	Orthogroups_2024-Update
Brara.D00980.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.G02475.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.H02152.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I03146.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Glyma.09G237000	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Glyma.13G237500	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.13G241900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
HORVU4Hr1G074990.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
LOC_Os01g15900	No alias	expressed protein	0.02	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Potri.008G087800	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Potri.017G084600	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.6G192200.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G033400.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.003G301700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc06g069760	No alias	Dof zinc finger protein 22	0.02	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.05	Orthogroups_2024-Update
Sopen05g003730	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	Predicted GO
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
BP	GO:0006855	drug transmembrane transport	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
MF	GO:0015238	drug transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015297	antiporter activity	IEP	Predicted GO
BP	GO:0015893	drug transport	IEP	Predicted GO
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Predicted GO
BP	GO:0016311	dephosphorylation	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	54	111

External Links

No external refs found!

Pp1s69_113V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation