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  5. Pp1s73_7V6

Pp1s73_7V6


Description : lob domain-containing


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s73_7V6
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_17759 No alias lob domain-containing protein 4 0.03 Orthogroups_2024-Update
At2g30340 No alias LBD13 [Source:UniProtKB/TrEMBL;Acc:A0A178VRU4] 0.03 Orthogroups_2024-Update
At3g26620 No alias LOB domain-containing protein 23... 0.03 Orthogroups_2024-Update
At3g27650 No alias LOB domain-containing protein 25... 0.05 Orthogroups_2024-Update
At5g15060 No alias LOB domain-containing protein 34... 0.02 Orthogroups_2024-Update
Brara.C02074.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C02407.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D02463.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E00171.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G145568 No alias LOB domain-containing protein 11 0.03 Orthogroups_2024-Update
Glyma.02G234600 No alias LOB domain-containing protein 13 0.03 Orthogroups_2024-Update
Glyma.14G021100 No alias LOB domain-containing protein 24 0.02 Orthogroups_2024-Update
Glyma.15G127900 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
Glyma.15G228100 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.18G024400 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
LOC_Os09g19950 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_127139g0010 No alias (at1g31320 : 199.0) LOB domain-containing protein 4... 0.03 Orthogroups_2024-Update
MA_16891g0020 No alias (at5g63090 : 162.0) Involved in lateral organ... 0.04 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.04 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00028054-RA No alias (at1g07900 : 124.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00041736-RA No alias (at1g07900 : 133.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00043015-RA No alias (at2g28500 : 127.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
PSME_00048913-RA No alias (at2g28500 : 129.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.02 Orthogroups_2024-Update
Pp1s170_93V6 No alias MDC12.5; lateral organ boundaries (LOB) protein... 0.04 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen02g035110 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update
Sopen06g022110 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 72 168
No external refs found!