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  5. Pp1s77_21V6

Pp1s77_21V6


Description : ribosomal protein l28


Gene families : OG_42_0007957 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007957_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s77_21V6
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Bradi2g40040 No alias Ribosomal L28 family 0.04 Orthogroups_2024-Update
HORVU1Hr1G000040.1 No alias component *(bL28c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
MA_10426581g0010 No alias (at2g33450 : 140.0) Ribosomal L28 family; FUNCTIONS IN:... 0.01 Orthogroups_2024-Update
Potri.010G068500 No alias Ribosomal L28 family 0.03 Orthogroups_2024-Update
Sopen09g033320 No alias Ribosomal L28 family 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR026569 Ribo_L28/L24 54 112
No external refs found!