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  5. Pp1s79_253V6

Pp1s79_253V6


Description : 60s ribosomal protein l29


Gene families : OG_42_0003521 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s79_253V6
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
228166 No alias Ribosomal L29e protein family 0.07 Orthogroups_2024-Update
A4A49_53313 No alias 60s ribosomal protein l29-2 0.11 Orthogroups_2024-Update
At3g06680 No alias 60S ribosomal protein L29 [Source:UniProtKB/TrEMBL;Acc:F4JC32] 0.09 Orthogroups_2024-Update
At3g06700 No alias 60S ribosomal protein L29-1... 0.04 Orthogroups_2024-Update
Brara.E03260.1 No alias component *(eL29) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Cre03.g207050 No alias Ribosomal L29e protein family 0.22 Orthogroups_2024-Update
HORVU1Hr1G059570.2 No alias component *(eL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
MA_10433318g0010 No alias no hits & (original description: no original description) 0.09 Orthogroups_2024-Update
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.01 Orthogroups_2024-Update
PSME_00015658-RA No alias no hits & (original description: no original description) 0.11 Orthogroups_2024-Update
Potri.002G196800 No alias Ribosomal L29e protein family 0.08 Orthogroups_2024-Update
Potri.008G107700 No alias Ribosomal L29e protein family 0.09 Orthogroups_2024-Update
Potri.010G142001 No alias Ribosomal L29e protein family 0.03 Orthogroups_2024-Update
Solyc05g053440 No alias 60S ribosomal protein L29, putative (AHRD V3.3 *** B9RZN1_RICCO) 0.15 Orthogroups_2024-Update
Sopen11g022530 No alias Ribosomal L29e protein family 0.04 Orthogroups_2024-Update
evm.model.tig00000269.24 No alias (at3g06680 : 86.3) Ribosomal L29e protein family;... 0.13 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 3 42
No external refs found!