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  5. Pp1s79_255V6

Pp1s79_255V6


Description : 60s ribosomal protein l31a


Gene families : OG_42_0001913 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s79_255V6
Cluster HCCA clusters: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
268515 No alias Ribosomal protein L31e family protein 0.24 Orthogroups_2024-Update
A4A49_04515 No alias 60s ribosomal protein l31 0.05 Orthogroups_2024-Update
At4g26230 No alias Putative ribosomal protein [Source:UniProtKB/TrEMBL;Acc:Q0WRN2] 0.02 Orthogroups_2024-Update
Bradi3g39870 No alias Ribosomal protein L31e family protein 0.18 Orthogroups_2024-Update
Bradi3g53460 No alias Ribosomal protein L31e family protein 0.22 Orthogroups_2024-Update
Brara.B01256.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Brara.C01233.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.I04723.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.J01097.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Cre12.g489153 No alias Ribosomal protein L31e family protein 0.37 Orthogroups_2024-Update
GRMZM2G074085 No alias Ribosomal protein L31e family protein 0.11 Orthogroups_2024-Update
Glyma.01G004300 No alias Ribosomal protein L31e family protein 0.21 Orthogroups_2024-Update
Glyma.05G223800 No alias Ribosomal protein L31e family protein 0.11 Orthogroups_2024-Update
Glyma.07G127500 No alias Ribosomal protein L31e family protein 0.29 Orthogroups_2024-Update
Glyma.08G030900 No alias Ribosomal protein L31e family protein 0.11 Orthogroups_2024-Update
HORVU6Hr1G070670.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
HORVU7Hr1G050170.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Kfl00006_0140 kfl00006_0140_v1.1 (at2g19740 : 154.0) Ribosomal protein L31e family... 0.06 Orthogroups_2024-Update
MA_14317g0010 No alias (q9mav7|rl31_pangi : 197.0) 60S ribosomal protein L31 -... 0.07 Orthogroups_2024-Update
MA_8286g0010 No alias (q9mav7|rl31_pangi : 193.0) 60S ribosomal protein L31 -... 0.02 Orthogroups_2024-Update
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.17 Orthogroups_2024-Update
PSME_00053840-RA No alias (q9mav7|rl31_pangi : 196.0) 60S ribosomal protein L31 -... 0.05 Orthogroups_2024-Update
Potri.001G269600 No alias Ribosomal protein L31e family protein 0.22 Orthogroups_2024-Update
Potri.009G064100 No alias Ribosomal protein L31e family protein 0.15 Orthogroups_2024-Update
Potri.018G070100 No alias Ribosomal protein L31e family protein 0.05 Orthogroups_2024-Update
Seita.1G297300.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Seita.4G139300.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Seita.6G204000.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Sobic.004G259700.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.25 Orthogroups_2024-Update
Sobic.007G211700.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.22 Orthogroups_2024-Update
Solyc12g008720 No alias 60S ribosomal protein L31 (AHRD V3.3 *** W9QLF2_9ROSA) 0.24 Orthogroups_2024-Update
Sopen05g003860 No alias Ribosomal protein L31e 0.05 Orthogroups_2024-Update
Sopen12g003650 No alias Ribosomal protein L31e 0.29 Orthogroups_2024-Update
evm.model.contig_477.12 No alias (q9mav7|rl31_pangi : 120.0) 60S ribosomal protein L31 -... 0.2 Orthogroups_2024-Update
evm.model.tig00020703.20 No alias (q9mav7|rl31_pangi : 155.0) 60S ribosomal protein L31 -... 0.17 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 11 92
No external refs found!