1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s80_36V6

Pp1s80_36V6


Description : endoplasmic reticulum


Gene families : OG_42_0001121 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s80_36V6
Cluster HCCA clusters: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
122175 No alias endoplasmic reticulum-type calcium-transporting ATPase 3 0.02 Orthogroups_2024-Update
A4A49_23796 No alias calcium-transporting atpase 4, endoplasmic reticulum-type 0.01 Orthogroups_2024-Update
Bradi1g09810 No alias endoplasmic reticulum-type calcium-transporting ATPase 3 0.04 Orthogroups_2024-Update
Bradi1g66150 No alias endomembrane-type CA-ATPase 4 0.03 Orthogroups_2024-Update
Cre11.g467795 No alias endoplasmic reticulum-type calcium-transporting ATPase 3 0.02 Orthogroups_2024-Update
Glyma.16G022200 No alias ER-type Ca2+-ATPase 2 0.03 Orthogroups_2024-Update
Kfl00112_0080 kfl00112_0080_v1.1 (at4g00900 : 1228.0) Type IIA (SERCA-type) Ca2+ ATPase,... 0.01 Orthogroups_2024-Update
MA_10427630g0010 No alias (at1g07670 : 1212.0) endomembrane-type CA-ATPase 4... 0.04 Orthogroups_2024-Update
Mp8g06730.1 No alias P2A-type calcium cation-transporting ATPase (ECA) 0.02 Orthogroups_2024-Update
PSME_00025607-RA No alias (at1g07670 : 1521.0) endomembrane-type CA-ATPase 4... 0.03 Orthogroups_2024-Update
Pp1s239_19V6 No alias endoplasmic reticulum 0.02 Orthogroups_2024-Update
Seita.9G106400.1 No alias P2A-type calcium cation-transporting ATPase *(ECA) 0.02 Orthogroups_2024-Update
Sobic.001G413900.1 No alias P2A-type calcium cation-transporting ATPase *(ECA) 0.03 Orthogroups_2024-Update
Sobic.009G020900.1 No alias P2A-type calcium cation-transporting ATPase *(ECA) 0.03 Orthogroups_2024-Update
Solyc01g096190 No alias Ca2+-ATPase 0.02 Orthogroups_2024-Update
Sopen07g012030 No alias E1-E2 ATPase 0.02 Orthogroups_2024-Update
Sopen11g030540 No alias E1-E2 ATPase 0.02 Orthogroups_2024-Update
evm.model.contig_2190.8 No alias (at1g07670 : 621.0) endomembrane-type CA-ATPase 4... 0.02 Orthogroups_2024-Update
evm.model.tig00020912.14 No alias (at1g10130 : 990.0) Encodes a golgi localized P2A-type... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF
GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032947 protein-containing complex scaffold activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006068 ATPase_P-typ_cation-transptr_C 809 1035
IPR004014 ATPase_P-typ_cation-transptr_N 9 76
No external refs found!