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  5. Pp1s83_174V6

Pp1s83_174V6


Description : 60s ribosomal protein


Gene families : OG_42_0001643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s83_174V6
Cluster HCCA clusters: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Bradi1g17920 No alias Ribosomal protein L19e family protein 0.04 Orthogroups_2024-Update
Bradi1g63010 No alias Ribosomal protein L19e family protein 0.03 Orthogroups_2024-Update
Brara.I00133.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.I05560.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.J00128.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Cre02.g075700 No alias Ribosomal protein L19e family protein 0.01 Orthogroups_2024-Update
HORVU4Hr1G049670.2 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Kfl00915_0030 kfl00915_0030_v1.1 (at1g02780 : 290.0) embryo defective 2386 (emb2386);... 0.03 Orthogroups_2024-Update
MA_1839g0010 No alias (at1g02780 : 287.0) embryo defective 2386 (emb2386);... 0.03 Orthogroups_2024-Update
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.02 Orthogroups_2024-Update
Pp1s121_144V6 No alias 60s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s3_375V6 No alias 60s ribosomal protein l19-3 0.04 Orthogroups_2024-Update
Seita.4G043900.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.004G045300.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.010G069400.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Solyc09g075430 No alias Ribosomal protein L19 (AHRD V3.3 *** K4CVC0_SOLLC) 0.03 Orthogroups_2024-Update
Sopen09g030210 No alias Ribosomal protein L19e 0.03 Orthogroups_2024-Update
evm.model.contig_735.3 No alias (at3g16780 : 205.0) Ribosomal protein L19e family... 0.02 Orthogroups_2024-Update
evm.model.tig00021181.1 No alias (at1g02780 : 206.0) embryo defective 2386 (emb2386);... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 146
No external refs found!