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  5. Pp1s84_202V6

Pp1s84_202V6


Description : membrane protein


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s84_202V6
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Brara.J02499.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Glyma.09G143800 No alias RHOMBOID-like 2 0.03 Orthogroups_2024-Update
Potri.001G241300 No alias RHOMBOID-like 1 0.02 Orthogroups_2024-Update
Potri.002G090400 No alias Rhomboid-related intramembrane serine protease family protein 0.02 Orthogroups_2024-Update
Seita.8G249900.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Seita.9G567800.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Sobic.001G321800.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Sopen03g004920 No alias Rhomboid family 0.03 Orthogroups_2024-Update
Sopen08g028820 No alias Rhomboid family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 106 246
No external refs found!