Pp1s85_168V6

Description : poly-a binding

Gene families : OG_42_0001464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s85_168V6
Cluster	HCCA clusters: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method	Actions
A4A49_22475	No alias	polyadenylate-binding protein 2	0.01	Orthogroups_2024-Update
Seita.4G089900.1	No alias	regulatory protein of poly(A) RNA polymerase activity	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	100	168

External Links

No external refs found!