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  5. Pp1s88_112V6

Pp1s88_112V6


Description : T1N15.11; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0002509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s88_112V6
Cluster HCCA clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_17159 No alias protein tify 6b 0.02 Orthogroups_2024-Update
A4A49_36100 No alias protein tify 6b 0.02 Orthogroups_2024-Update
At3g17860 No alias Protein TIFY 6B [Source:UniProtKB/Swiss-Prot;Acc:Q9LVI4] 0.02 Orthogroups_2024-Update
Bradi3g36380 No alias jasmonate-zim-domain protein 3 0.02 Orthogroups_2024-Update
Brara.G02433.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G126507 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Glyma.09G123600 No alias jasmonate-zim-domain protein 3 0.03 Orthogroups_2024-Update
HORVU4Hr1G087520.4 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
MA_6326g0010 No alias (at3g17860 : 100.0) JAZs are direct targets of the... 0.03 Orthogroups_2024-Update
Potri.010G108200 No alias jasmonate-zim-domain protein 3 0.02 Orthogroups_2024-Update
Seita.2G200400.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Sopen01g001450 No alias tify domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018467 CCT_CS 345 368
IPR010399 Tify_dom 212 243
No external refs found!