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  5. Pp1s88_174V6

Pp1s88_174V6


Description : mads box


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s88_174V6
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
A4A49_07845 No alias agamous-like mads-box protein agl8 0.03 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.02 Orthogroups_2024-Update
At1g77950 No alias AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6] 0.03 Orthogroups_2024-Update
At5g60910 No alias Agamous-like MADS-box protein AGL8... 0.03 Orthogroups_2024-Update
Brara.B01837.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.K00198.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G064100 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.09G266400 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
Glyma.10G084700 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Glyma.10G085600 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
HORVU3Hr1G095090.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g03070 No alias transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G092300 No alias AGAMOUS-like 104 0.03 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Potri.004G130900 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.03 Orthogroups_2024-Update
Seita.1G273400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
Seita.2G002300.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
Seita.3G280400.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Seita.6G194800.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G314400.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G029200.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Solyc10g017630 No alias MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!