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  5. Pp1s90_184V6

Pp1s90_184V6


Description : ap2 erf domain-containing transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s90_184V6
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
68470 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
80895 No alias ethylene responsive element binding factor 2 0.01 Orthogroups_2024-Update
AC198403.3_FG001 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At2g22200 No alias Ethylene-responsive transcription factor ERF056... 0.03 Orthogroups_2024-Update
Bradi1g17961 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g31480 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Brara.A00881.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.C03348.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Brara.E02172.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.E02619.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.H01575.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.H01576.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.J02528.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Glyma.02G080200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G263700 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Glyma.06G290000 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Glyma.09G147200 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os02g32140 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g46440 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g55520 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00050134-RA No alias (at5g19790 : 92.0) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
Potri.002G065600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G087200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G021000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s124_33V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s133_11V6 No alias c-repeat binding factor 4 0.02 Orthogroups_2024-Update
Pp1s13_457V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s276_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G481400.1 No alias transcription factor component *(HRE/RAP2.12) of... 0.03 Orthogroups_2024-Update
Sobic.002G081300.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Sobic.004G283300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G058732.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Solyc05g013540 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g008350 No alias dehydration responsive element binding protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 20 69
No external refs found!