Pp1s98_7V6

Description : splicing factor 3b subunit 2

Gene families : OG_42_0003742 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003742_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s98_7V6
Cluster	HCCA clusters: Cluster_127

Target	Alias	Description	ECC score	Gene Family Method
A4A49_62441	No alias	hypothetical protein	0.01	Orthogroups_2024-Update
At1g11520	No alias	Pliceosome associated protein-like protein...	0.01	Orthogroups_2024-Update
Glyma.15G071600	No alias	proline-rich spliceosome-associated (PSP) family protein	0.01	Orthogroups_2024-Update
Seita.1G375000.1	No alias	component *(SF3B2) of splicing factor 3B complex	0.01	Orthogroups_2024-Update
Seita.4G290900.1	No alias	component *(SF3B2) of splicing factor 3B complex	0.01	Orthogroups_2024-Update
Sopen02g023470	No alias	Domain of unknown function (DUF382)	0.04	Orthogroups_2024-Update
Sopen03g002520	No alias	Domain of unknown function (DUF382)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006568	PSP_pro-rich	340	385
IPR007180	DUF382	206	331

External Links

No external refs found!