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  5. Pp1s99_139V6

Pp1s99_139V6


Description : transitional endoplasmic reticulum


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s99_139V6
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
At3g09840 No alias AT3G09840 protein [Source:UniProtKB/TrEMBL;Acc:B9DI55] 0.02 Orthogroups_2024-Update
Bradi1g51940 No alias cell division cycle 48C 0.02 Orthogroups_2024-Update
Bradi1g74916 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
Brara.C02937.1 No alias platform ATPase CDC48 0.02 Orthogroups_2024-Update
Brara.C03257.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
Cre06.g269950 No alias ATPase, AAA-type, CDC48 protein 0.06 Orthogroups_2024-Update
GRMZM2G703490 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
Glyma.08G186800 No alias cell division cycle 48C 0.02 Orthogroups_2024-Update
Glyma.12G177100 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
Glyma.13G143600 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
Glyma.13G323600 No alias ATPase, AAA-type, CDC48 protein 0.03 Orthogroups_2024-Update
Kfl00069_0370 kfl00069_0370_v1.1 (at3g56690 : 315.0) encodes a protein similar to ATPases... 0.01 Orthogroups_2024-Update
Kfl00606_0060 kfl00606_0060_v1.1 (at5g03340 : 1347.0) ATPase, AAA-type, CDC48 protein;... 0.02 Orthogroups_2024-Update
LOC_Os11g11340 No alias CIP111, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00007725-RA No alias (at3g53230 : 1417.0) ATPase, AAA-type, CDC48 protein;... 0.04 Orthogroups_2024-Update
PSME_00018599-RA No alias (at5g03340 : 512.0) ATPase, AAA-type, CDC48 protein;... 0.01 Orthogroups_2024-Update
Potri.006G125500 No alias ATPase, AAA-type, CDC48 protein 0.03 Orthogroups_2024-Update
Seita.9G239600.1 No alias platform ATPase CDC48 0.04 Orthogroups_2024-Update
Seita.9G537700.1 No alias platform ATPase CDC48 0.02 Orthogroups_2024-Update
Sobic.001G236300.1 No alias platform ATPase CDC48 0.02 Orthogroups_2024-Update
Solyc11g069720 No alias Cell division cycle protein 48 homolog (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
evm.model.tig00021463.11 No alias (at3g09840 : 945.0) Encodes a cell division cycle... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0032947 protein-containing complex scaffold activity IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003338 CDC4_N-term_subdom 39 120
IPR004201 Cdc48_dom2 141 204
IPR003959 ATPase_AAA_core 254 383
IPR003959 ATPase_AAA_core 527 660
No external refs found!