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  5. Solyc12g042530

Solyc12g042530


Description : phosphatidylinositol-glycan biosynthesis class F-like protein (AHRD V3.3 *** AT1G16040.1)


Gene families : OG_42_0006885 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006885_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g042530
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g03690 No alias glycosylphosphatidylinositol anchor biosynthesis protein... 0.02 Orthogroups_2024-Update
Seita.9G555100.1 No alias phosphoethanolamine transferase-II *(PIG-F) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEA InterProScan predictions
BP GO:0006506 GPI anchor biosynthetic process IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009580 GPI_biosynthesis_protein_Pig-F 40 208
No external refs found!