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  5. Solyc12g088400

Solyc12g088400


Description : Zinc-finger protein (AHRD V3.3 *-* Q40899_PETHY)


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g088400
Cluster HCCA clusters: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
Brara.F01949.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g31240 No alias ZOS3-10 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g60560 No alias ZOS3-21 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g38600 No alias ZOS5-09 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
PSME_00052819-RA No alias (at2g45120 : 101.0) C2H2-like zinc finger protein;... 0.03 Orthogroups_2024-Update
PSME_00056793-RA No alias (at1g02040 : 87.8) C2H2-type zinc finger family protein;... 0.03 Orthogroups_2024-Update
Potri.009G089400 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Potri.014G066200 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Sopen12g030370 No alias C2H2-type zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006481 C-terminal protein methylation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0018410 C-terminal protein amino acid modification IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0043687 post-translational protein modification IEP Predicted GO
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!