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  5. Solyc12g099080

Solyc12g099080


Description : ADP-ribosylation factor (AHRD V3.3 *** ARF_VIGUN)


Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc12g099080
Cluster HCCA clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
At3g62290 No alias ADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5] 0.04 Orthogroups_2024-Update
Bradi1g53867 No alias Ras-related small GTP-binding family protein 0.03 Orthogroups_2024-Update
Bradi2g53082 No alias ADP-ribosylation factor A1F 0.02 Orthogroups_2024-Update
Brara.G02439.1 No alias ARF-GTPase *(ARF1) 0.03 Orthogroups_2024-Update
GRMZM5G836182 No alias Ras-related small GTP-binding family protein 0.04 Orthogroups_2024-Update
Glyma.19G219200 No alias ADP-ribosylation factor A1F 0.03 Orthogroups_2024-Update
Kfl00446_0020 kfl00446_0020_v1.... (p51823|arf2_orysa : 357.0) ADP-ribosylation factor 2 -... 0.02 Orthogroups_2024-Update
Potri.001G301200 No alias ADP-ribosylation factor A1E 0.03 Orthogroups_2024-Update
Solyc04g025560 No alias ADP-ribosylation factor (AHRD V3.3 *** ARF_VIGUN) 0.03 Orthogroups_2024-Update
Sopen01g022790 No alias ADP-ribosylation factor family 0.03 Orthogroups_2024-Update
Sopen01g044370 No alias ADP-ribosylation factor family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000228 nuclear chromosome IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 56 228
No external refs found!