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  5. Sopen00g005660

Sopen00g005660


Description : Ribosomal protein S10p/S20e


Gene families : OG_42_0001666 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen00g005660
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
115495 No alias Ribosomal protein S10p/S20e family protein 0.18 Orthogroups_2024-Update
A4A49_09412 No alias 40s ribosomal protein s20-2 0.1 Orthogroups_2024-Update
At3g47370 No alias 40S ribosomal protein S20-2... 0.06 Orthogroups_2024-Update
Bradi1g51650 No alias Ribosomal protein S10p/S20e family protein 0.25 Orthogroups_2024-Update
Brara.B01551.1 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.13 Orthogroups_2024-Update
Brara.C01470.1 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.28 Orthogroups_2024-Update
Brara.I00689.1 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.21 Orthogroups_2024-Update
Brara.J00726.1 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.21 Orthogroups_2024-Update
Cre16.g660150 No alias Ribosomal protein S10p/S20e family protein 0.19 Orthogroups_2024-Update
Glyma.03G142200 No alias Ribosomal protein S10p/S20e family protein 0.11 Orthogroups_2024-Update
Glyma.03G142300 No alias Ribosomal protein S10p/S20e family protein 0.1 Orthogroups_2024-Update
Glyma.11G002400 No alias Ribosomal protein S10p/S20e family protein 0.06 Orthogroups_2024-Update
Glyma.19G145000 No alias Ribosomal protein S10p/S20e family protein 0.09 Orthogroups_2024-Update
Glyma.19G145100 No alias Ribosomal protein S10p/S20e family protein 0.06 Orthogroups_2024-Update
HORVU7Hr1G028050.5 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Kfl00331_0150 kfl00331_0150_v1.1 (at5g62300 : 189.0) Ribosomal protein S10p/S20e family... 0.05 Orthogroups_2024-Update
MA_10429759g0010 No alias (at5g62300 : 200.0) Ribosomal protein S10p/S20e family... 0.04 Orthogroups_2024-Update
Mp2g09440.1 No alias component RPS20 of SSU proteome 0.08 Orthogroups_2024-Update
PSME_00007666-RA No alias (at5g62300 : 193.0) Ribosomal protein S10p/S20e family... 0.03 Orthogroups_2024-Update
PSME_00047252-RA No alias (at3g47370 : 204.0) Ribosomal protein S10p/S20e family... 0.07 Orthogroups_2024-Update
Potri.012G128300 No alias Ribosomal protein S10p/S20e family protein 0.09 Orthogroups_2024-Update
Potri.015G129800 No alias Ribosomal protein S10p/S20e family protein 0.03 Orthogroups_2024-Update
Pp1s257_105V6 No alias 40s ribosomal protein 0.18 Orthogroups_2024-Update
Pp1s271_9V6 No alias 40s ribosomal protein 0.11 Orthogroups_2024-Update
Seita.4G023300.1 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Seita.9G468800.1 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Sobic.001G436200.1 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.21 Orthogroups_2024-Update
Sobic.010G023900.1 No alias component *(uS10) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Solyc01g096580 No alias ribosomal protein S10p/S20e family protein 0.18 Orthogroups_2024-Update
Solyc01g096590 No alias ribosomal protein S10p/S20e family protein 0.12 Orthogroups_2024-Update
Sopen00g005650 No alias Ribosomal protein S10p/S20e 0.12 Orthogroups_2024-Update
Sopen01g040310 No alias Ribosomal protein S10p/S20e 0.12 Orthogroups_2024-Update
evm.model.contig_560.7 No alias (at3g47370 : 151.0) Ribosomal protein S10p/S20e family... 0.2 Orthogroups_2024-Update
evm.model.tig00000842.28 No alias (p35686|rs20_orysa : 147.0) 40S ribosomal protein S20 -... 0.17 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 25 119
No external refs found!