Description : Integrase core domain
Gene families : OG_42_0000434 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000434_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen00g008040 | |
Cluster | HCCA clusters: Cluster_25 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sopen01g025320 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.04 | Orthogroups_2024-Update | |
Sopen02g006720 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen04g007160 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.04 | Orthogroups_2024-Update | |
Sopen05g011200 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen05g018820 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
Sopen05g028840 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen06g013240 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen07g020500 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
Sopen07g028620 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.01 | Orthogroups_2024-Update | |
Sopen10g017790 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_4504.1 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |