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  5. Sopen01g003890

Sopen01g003890


Description : Maintenance of mitochondrial structure and function


Gene families : OG_42_0004886 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g003890
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Bradi5g24960 No alias RP non-ATPase subunit 8A 0.04 Orthogroups_2024-Update
Brara.B00188.1 No alias regulatory component *(RPN8) of 26S proteasome 0.02 Orthogroups_2024-Update
Cre06.g278256 No alias Mov34/MPN/PAD-1 family protein 0.01 Orthogroups_2024-Update
Pp1s197_115V6 No alias 26s proteasome regulatory subunit 0.02 Orthogroups_2024-Update
Solyc01g008370 No alias putative 26S proteasome subunit 0.03 Orthogroups_2024-Update
evm.model.tig00000403.78 No alias (at3g11270 : 381.0) maternal effect embryo arrest 34... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR024969 Rpn11/EIF3F_C 174 285
IPR000555 JAMM/MPN+_dom 15 124
No external refs found!