Sopen01g004490

Description : Ring finger domain

Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g004490
Cluster	HCCA clusters: Cluster_250

Target	Alias	Description	ECC score	Gene Family Method
A4A49_41488	No alias	e3 ubiquitin-protein ligase rduf1	0.03	Orthogroups_2024-Update
Bradi1g62350	No alias	RING-H2 finger C1A	0.03	Orthogroups_2024-Update
Brara.E02211.1	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Potri.004G122000	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
Potri.014G139400	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Potri.015G127600	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Sopen08g021220	No alias	Ring finger domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	InterProScan predictions
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	190	232
IPR039525	RNF126-like_zinc-ribbon	7	37

External Links

No external refs found!