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  5. Sopen01g004590

Sopen01g004590


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family


Gene families : OG_42_0001724 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001724_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g004590
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
19071 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.08 Orthogroups_2024-Update
A4A49_02333 No alias 60s ribosomal protein l30-2 0.17 Orthogroups_2024-Update
A4A49_19973 No alias 60s ribosomal protein l30-2 0.17 Orthogroups_2024-Update
A4A49_60378 No alias 60s ribosomal protein l30-2 0.04 Orthogroups_2024-Update
At1g77940 No alias 60S ribosomal protein L30-2... 0.03 Orthogroups_2024-Update
Bradi1g31460 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.18 Orthogroups_2024-Update
Bradi2g10400 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.08 Orthogroups_2024-Update
Bradi2g21770 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.09 Orthogroups_2024-Update
Brara.A02913.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.34 Orthogroups_2024-Update
Brara.C03701.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.42 Orthogroups_2024-Update
Brara.E02321.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.36 Orthogroups_2024-Update
Brara.G02123.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
Brara.G03541.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Cre10.g420750 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.2 Orthogroups_2024-Update
GRMZM2G027728 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 Orthogroups_2024-Update
GRMZM2G044137 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.08 Orthogroups_2024-Update
Glyma.02G002300 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.09 Orthogroups_2024-Update
Glyma.08G257100 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.17 Orthogroups_2024-Update
Glyma.10G002400 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.2 Orthogroups_2024-Update
Glyma.18G281200 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.12 Orthogroups_2024-Update
HORVU1Hr1G068640.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
HORVU3Hr1G038950.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
HORVU7Hr1G110660.2 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Kfl00019_0450 kfl00019_0450_v1.1 (o49884|rl30_luplu : 186.0) 60S ribosomal protein L30 -... 0.02 Orthogroups_2024-Update
LOC_Os01g16890 No alias ribosomal protein L7Ae, putative, expressed 0.1 Orthogroups_2024-Update
LOC_Os01g59730 No alias ribosomal protein L7Ae, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g41110 No alias ribosomal protein L7Ae, putative, expressed 0.06 Orthogroups_2024-Update
MA_10431626g0010 No alias (o49884|rl30_luplu : 184.0) 60S ribosomal protein L30 -... 0.05 Orthogroups_2024-Update
MA_6354g0010 No alias (o49884|rl30_luplu : 204.0) 60S ribosomal protein L30 -... 0.08 Orthogroups_2024-Update
Mp7g01690.1 No alias component RPL30 of LSU proteome component 0.1 Orthogroups_2024-Update
PSME_00026808-RA No alias (o49884|rl30_luplu : 160.0) 60S ribosomal protein L30 -... 0.14 Orthogroups_2024-Update
PSME_00033349-RA No alias (o49884|rl30_luplu : 192.0) 60S ribosomal protein L30 -... 0.13 Orthogroups_2024-Update
Potri.004G196500 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.05 Orthogroups_2024-Update
Potri.007G086800 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 Orthogroups_2024-Update
Potri.009G158700 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.12 Orthogroups_2024-Update
Pp1s106_167V6 No alias ribosomal protein l30 0.14 Orthogroups_2024-Update
Pp1s13_391V6 No alias ribosomal protein l30 0.28 Orthogroups_2024-Update
Pp1s41_251V6 No alias ribosomal protein l30 0.25 Orthogroups_2024-Update
Pp1s50_55V6 No alias ribosomal protein l30 0.06 Orthogroups_2024-Update
Pp1s91_111V6 No alias ribosomal protein l30 0.04 Orthogroups_2024-Update
Seita.3G197300.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Seita.5G043000.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.009G179100.1 No alias component *(eL30) of large ribosomal-subunit (LSU) proteome 0.24 Orthogroups_2024-Update
Solyc01g009100 No alias 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) 0.36 Orthogroups_2024-Update
Solyc04g072660 No alias 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) 0.15 Orthogroups_2024-Update
Solyc11g071490 No alias 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) 0.21 Orthogroups_2024-Update
Sopen04g028860 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 0.04 Orthogroups_2024-Update
evm.model.contig_3502.5 No alias (q9sdg6|rl30_orysa : 151.0) 60S ribosomal protein L30 -... 0.46 Orthogroups_2024-Update
evm.model.tig00001164.6 No alias (o49884|rl30_luplu : 168.0) 60S ribosomal protein L30 -... 0.34 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 13 105
No external refs found!