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  5. evm.model.contig_2055.5

evm.model.contig_2055.5


Description : no hits & (original description: no original description)


Gene families : OG_42_0001670 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2055.5
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Bradi4g45080 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Orthogroups_2024-Update
Glyma.12G170900 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Orthogroups_2024-Update
HORVU1Hr1G013600.3 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.02 Orthogroups_2024-Update
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.02 Orthogroups_2024-Update
Sobic.008G002300.1 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004181 Znf_MIZ 723 772
No external refs found!