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  5. evm.model.contig_2063.3

evm.model.contig_2063.3


Description : no hits & (original description: no original description)


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2063.3
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
At3g16130 No alias RHO guanyl-nucleotide exchange factor 13... 0.02 Orthogroups_2024-Update
At3g55660 No alias Rop guanine nucleotide exchange factor 6... 0.06 Orthogroups_2024-Update
Brara.I03817.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.05 Orthogroups_2024-Update
Brara.J02620.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.06 Orthogroups_2024-Update
Glyma.14G064000 No alias ROP guanine nucleotide exchange factor 5 0.07 Orthogroups_2024-Update
Glyma.18G232800 No alias RHO guanyl-nucleotide exchange factor 3 0.05 Orthogroups_2024-Update
HORVU6Hr1G068660.4 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.01 Orthogroups_2024-Update
LOC_Os10g40270 No alias ATROPGEF7/ROPGEF7, putative, expressed 0.01 Orthogroups_2024-Update
MA_66695g0010 No alias (at5g02010 : 540.0) Encodes a member of KPP-like gene... 0.03 Orthogroups_2024-Update
PSME_00010048-RA No alias (at4g38430 : 516.0) Member of the RopGEF (guanine... 0.02 Orthogroups_2024-Update
Solyc08g006550 No alias Rop guanine nucleotide exchange factor, putative (AHRD... 0.07 Orthogroups_2024-Update
Sopen08g002510 No alias PRONE (Plant-specific Rop nucleotide exchanger) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 2 161
No external refs found!