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evm.model.contig_2092.1


Description : no hits & (original description: no original description)


Gene families : OG_42_0000616 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2092.1
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g41520 No alias OsFBX200 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.5G153600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G109500.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G362701.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G285300.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004071 aspartate-ammonia ligase activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 172 210
No external refs found!