Description : (at3g12080 : 186.0) embryo defective 2738 (emb2738); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP-binding, EngA (InterPro:IPR016484), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP binding;GTP binding (TAIR:AT5G39960.1); Has 46500 Blast hits to 25681 proteins in 2968 species: Archae - 249; Bacteria - 36237; Metazoa - 387; Fungi - 432; Plants - 421; Viruses - 0; Other Eukaryotes - 8774 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)
Gene families : OG_42_0007627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007627_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Porphyridium release: evm.model.contig_2130.11 | |
Cluster | HCCA clusters: Cluster_45 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi4g12180 | No alias | GTP-binding family protein | 0.02 | Orthogroups_2024-Update | |
Cre16.g658450 | No alias | GTP-binding family protein | 0.04 | Orthogroups_2024-Update | |
Kfl00126_0010 | kfl00126_0010_v1.1 | (at3g12080 : 574.0) embryo defective 2738 (emb2738);... | 0.07 | Orthogroups_2024-Update | |
Pp1s123_84V6 | No alias | gtp-binding protein | 0.02 | Orthogroups_2024-Update | |
Seita.8G208000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.005G197300.1 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
evm.model.tig00020780.28 | No alias | (at3g12080 : 327.0) embryo defective 2738 (emb2738);... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005525 | GTP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Predicted GO |
MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006415 | translational termination | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Predicted GO |
MF | GO:0016778 | diphosphotransferase activity | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
BP | GO:0022411 | cellular component disassembly | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Predicted GO |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
No external refs found! |