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  5. evm.model.contig_2286.10

evm.model.contig_2286.10


Description : (at3g04870 : 597.0) Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.; zeta-carotene desaturase (ZDS); FUNCTIONS IN: carotene 7,8-desaturase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Carotene 7,8-desaturase (InterPro:IPR014103); BEST Arabidopsis thaliana protein match is: phytoene desaturase 3 (TAIR:AT4G14210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9ztp4|zds_maize : 591.0) Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) (Carotene 7,8-desaturase) - Zea mays (Maize) & (reliability: 1194.0) & (original description: no original description)


Gene families : OG_42_0006853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2286.10
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G049700.1 No alias zeta-carotene desaturase *(ZDS) 0.01 Orthogroups_2024-Update
Kfl00012_0080 kfl00012_0080_v1.1 (q9smj3|zds_capan : 802.0) Zeta-carotene desaturase,... 0.02 Orthogroups_2024-Update
LOC_Os07g10490 No alias zeta-carotene desaturase, chloroplast/chromoplast... 0.02 Orthogroups_2024-Update
Mp5g14090.1 No alias zeta-carotene desaturase (ZDS) 0.02 Orthogroups_2024-Update
Pp1s277_10V6 No alias zeta-carotene desaturase 0.02 Orthogroups_2024-Update
evm.model.tig00000219.43 No alias (at3g04870 : 558.0) Involved in the biosynthesis of... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004583 dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
BP GO:0006493 protein O-linked glycosylation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 51 517
No external refs found!