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  5. evm.model.contig_2294.2

evm.model.contig_2294.2


Description : (at4g33260 : 340.0) putative cdc20 protein (CDC20.2); CDC20.2; FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: heterotrimeric G-protein complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33270.1). & (reliability: 630.0) & (original description: no original description)


Gene families : OG_42_0000946 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2294.2
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
A4A49_23682 No alias cell division cycle 20.1, cofactor of apc complex 0.02 Orthogroups_2024-Update
Bradi4g36170 No alias Transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update
Brara.A00467.1 No alias substrate specificity component *(CDC20) of APC/C E3... 0.06 Orthogroups_2024-Update
Brara.K00557.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Cre09.g399911 No alias Transducin family protein / WD-40 repeat family protein 0.04 Orthogroups_2024-Update
Glyma.01G229600 No alias Transducin family protein / WD-40 repeat family protein 0.06 Orthogroups_2024-Update
Glyma.03G204700 No alias Transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update
Glyma.11G012400 No alias Transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
LOC_Os04g51110 No alias WD repeat-containing protein, putative, expressed 0.01 Orthogroups_2024-Update
Potri.013G048900 No alias Transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update
Solyc03g096870 No alias cell division control 20-1 0.04 Orthogroups_2024-Update
Solyc06g072830 No alias WD40 repeat-containing protein (AHRD V3.3 *** A0A103YEC3_CYNCS) 0.05 Orthogroups_2024-Update
Sopen06g029210 No alias WD domain, G-beta repeat 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 483 516
IPR024977 Apc4_WD40_dom 345 410
IPR024977 Apc4_WD40_dom 265 326
No external refs found!