Description : no hits & (original description: no original description)
Gene families : OG_42_0001127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Porphyridium release: evm.model.contig_2390.1 | |
Cluster | HCCA clusters: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sopen00g001750 | No alias | Aspartyl protease | 0.02 | Orthogroups_2024-Update | |
Sopen06g015340 | No alias | Retrotransposon gag protein | 0.01 | Orthogroups_2024-Update | |
Sopen07g008700 | No alias | Retrotransposon gag protein | 0.02 | Orthogroups_2024-Update | |
Sopen07g011820 | No alias | Aspartyl protease | 0.02 | Orthogroups_2024-Update | |
Sopen08g012560 | No alias | Retrotransposon gag protein | 0.01 | Orthogroups_2024-Update | |
Sopen12g015060 | No alias | Retrotransposon gag protein | 0.03 | Orthogroups_2024-Update | |
Sopen12g023320 | No alias | Retrotransposon gag protein | 0.03 | Orthogroups_2024-Update | |
Sopen12g027350 | No alias | Retrotransposon gag protein | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_3556.1 | No alias | no hits & (original description: no original description) | 0.2 | Orthogroups_2024-Update | |
evm.model.contig_3711.2 | No alias | no hits & (original description: no original description) | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_3776.1 | No alias | no hits & (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
evm.model.contig_3777.1 | No alias | no hits & (original description: no original description) | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_4504.3 | No alias | no hits & (original description: no original description) | 0.14 | Orthogroups_2024-Update | |
evm.model.contig_4558.1 | No alias | no hits & (original description: no original description) | 0.06 | Orthogroups_2024-Update | |
evm.model.contig_4579.1 | No alias | no hits & (original description: no original description) | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_4586.1 | No alias | no hits & (original description: no original description) | 0.23 | Orthogroups_2024-Update | |
evm.model.contig_4650.1 | No alias | no hits & (original description: no original description) | 0.18 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0015074 | DNA integration | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005162 | Retrotrans_gag_dom | 57 | 146 |
No external refs found! |