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  5. evm.model.contig_3397.5

evm.model.contig_3397.5


Description : (at5g51820 : 656.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (q9smm0|pgmp_brana : 651.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Brassica napus (Rape) & (reliability: 1282.0) & (original description: no original description)


Gene families : OG_42_0002374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3397.5
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
269569 No alias Phosphoglucomutase/phosphomannomutase family protein 0.02 Orthogroups_2024-Update
Bradi1g11440 No alias Phosphoglucomutase/phosphomannomutase family protein 0.01 Orthogroups_2024-Update
Brara.I03257.1 No alias EC_5.4 intramolecular transferase & cytosolic phosphoglucomutase 0.02 Orthogroups_2024-Update
Cre06.g278210 No alias phosphoglucomutase 0.01 Orthogroups_2024-Update
GRMZM2G023289 No alias Phosphoglucomutase/phosphomannomutase family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G007620.2 No alias EC_5.4 intramolecular transferase & cytosolic phosphoglucomutase 0.01 Orthogroups_2024-Update
Kfl00842_0050 kfl00842_0050_v1.1 (q9m4g5|pgmp_soltu : 859.0) Phosphoglucomutase,... 0.02 Orthogroups_2024-Update
LOC_Os03g50480 No alias phosphoglucomutase, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g13750.1 No alias plastidial phosphoglucomutase 0.03 Orthogroups_2024-Update
Mp5g10560.1 No alias cytosolic phosphoglucomutase 0.03 Orthogroups_2024-Update
Pp1s124_155V6 No alias phosphoglucomutase 0.02 Orthogroups_2024-Update
Pp1s199_101V6 No alias phosphoglucomutase 0.03 Orthogroups_2024-Update
Sobic.003G222500.1 No alias plastidial phosphoglucomutase & EC_5.4 intramolecular transferase 0.02 Orthogroups_2024-Update
Sopen04g016840 No alias Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 0.02 Orthogroups_2024-Update
evm.model.tig00021105.50 No alias (at5g51820 : 383.0) Encodes a plastid isoform of the... 0.04 Orthogroups_2024-Update
evm.model.tig00021105.51 No alias (q9sm59|pgmp_pea : 290.0) Phosphoglucomutase,... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005845 A-D-PHexomutase_a/b/a-II 199 305
IPR005846 A-D-PHexomutase_a/b/a-III 314 435
IPR005844 A-D-PHexomutase_a/b/a-I 17 155
No external refs found!