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evm.model.contig_3402.13


Description : (at4g13730 : 129.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT1G04830.1). & (reliability: 258.0) & (original description: no original description)


Gene families : OG_42_0002162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3402.13
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Seita.8G119700.1 No alias Rab GTPase-activating protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 159 423
No external refs found!