evm.model.contig_3454.1

Description : (at2g04030 : 568.0) Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.; CR88; FUNCTIONS IN: ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 89.1 (TAIR:AT3G07770.1); Has 8908 Blast hits to 8859 proteins in 2447 species: Archae - 4; Bacteria - 3393; Metazoa - 2086; Fungi - 314; Plants - 461; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (q08277|hsp82_maize : 538.0) Heat shock protein 82 - Zea mays (Maize) & (reliability: 1136.0) & (original description: no original description)

Gene families : OG_42_0000360 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Porphyridium release: evm.model.contig_3454.1
Cluster	HCCA clusters: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
230177	No alias	HEAT SHOCK PROTEIN 81.4	0.02	Orthogroups_2024-Update
At3g07770	No alias	Heat shock protein 90-6, mitochondrial...	0.01	Orthogroups_2024-Update
Bradi1g30130	No alias	Chaperone protein htpG family protein	0.02	Orthogroups_2024-Update
Bradi4g06370	No alias	HEAT SHOCK PROTEIN 89.1	0.03	Orthogroups_2024-Update
Brara.A01424.1	No alias	chaperone *(Hsp90)	0.03	Orthogroups_2024-Update
Brara.C01247.1	No alias	chaperone *(Hsp90)	0.02	Orthogroups_2024-Update
Brara.C01276.1	No alias	chaperone *(Hsp90)	0.02	Orthogroups_2024-Update
Cre12.g514850	No alias	Chaperone protein htpG family protein	0.03	Orthogroups_2024-Update
GRMZM2G002220	No alias	Chaperone protein htpG family protein	0.02	Orthogroups_2024-Update
Glyma.02G124500	No alias	Chaperone protein htpG family protein	0.02	Orthogroups_2024-Update
Glyma.14G007700	No alias	HEAT SHOCK PROTEIN 89.1	0.02	Orthogroups_2024-Update
HORVU5Hr1G027910.15	No alias	chaperone *(Hsp90)	0.03	Orthogroups_2024-Update
MA_10431770g0010	No alias	(at2g04030 : 1110.0) Encodes a chloroplast-targeted...	0.03	Orthogroups_2024-Update
Mp2g04900.1	No alias	chaperone (Hsp90)	0.01	Orthogroups_2024-Update
Mp5g15940.1	No alias	chaperone (Hsp90)	0.02	Orthogroups_2024-Update
PSME_00002559-RA	No alias	(at2g04030 : 1108.0) Encodes a chloroplast-targeted...	0.02	Orthogroups_2024-Update
PSME_00005303-RA	No alias	(at2g04030 : 1018.0) Encodes a chloroplast-targeted...	0.02	Orthogroups_2024-Update
PSME_00010812-RA	No alias	(p35016\|enpl_catro : 974.0) Endoplasmin homolog...	0.02	Orthogroups_2024-Update
Potri.008G112700	No alias	Chaperone protein htpG family protein	0.02	Orthogroups_2024-Update
Potri.014G164900	No alias	HEAT SHOCK PROTEIN 89.1	0.01	Orthogroups_2024-Update
Pp1s291_62V6	No alias	heat shock protein 90	0.02	Orthogroups_2024-Update
Seita.2G241600.1	No alias	chaperone *(Hsp90)	0.02	Orthogroups_2024-Update
Sobic.007G224100.1	No alias	chaperone *(Hsp90)	0.02	Orthogroups_2024-Update
Sobic.008G111600.1	No alias	chaperone *(Hsp90)	0.02	Orthogroups_2024-Update
Solyc07g047790	No alias	Heat shock protein, putative (AHRD V3.3 *** B9T0C8_RICCO)	0.02	Orthogroups_2024-Update
Sopen05g006470	No alias	Hsp90 protein	0.02	Orthogroups_2024-Update
Sopen07g024230	No alias	Hsp90 protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006457	protein folding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0051082	unfolded protein binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0003747	translation release factor activity	IEP	Predicted GO
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0004817	cysteine-tRNA ligase activity	IEP	Predicted GO
CC	GO:0005730	nucleolus	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
BP	GO:0006415	translational termination	IEP	Predicted GO
BP	GO:0006423	cysteinyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
MF	GO:0008079	translation termination factor activity	IEP	Predicted GO
MF	GO:0008134	transcription factor binding	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predicted GO
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
BP	GO:0022411	cellular component disassembly	IEP	Predicted GO
BP	GO:0032984	protein-containing complex disassembly	IEP	Predicted GO
BP	GO:0043624	cellular protein complex disassembly	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001404	Hsp90_fam	265	757

External Links

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evm.model.contig_3454.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation