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  5. evm.model.contig_3470.3

evm.model.contig_3470.3


Description : no hits & (original description: no original description)


Gene families : OG_42_0004215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3470.3
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Brara.K01485.1 No alias plastidial ribonucleoprotein *(CP31) 0.01 Orthogroups_2024-Update
evm.model.tig00000944.16 No alias (at5g50250 : 101.0) Encodes a RNA binding protein. A... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004819 glutamine-tRNA ligase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008705 methionine synthase activity IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0010466 negative regulation of peptidase activity IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010941 regulation of cell death IEP Predicted GO
BP GO:0010951 negative regulation of endopeptidase activity IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0016032 viral process IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0019079 viral genome replication IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
BP GO:0030162 regulation of proteolysis IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
MF GO:0031419 cobalamin binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042981 regulation of apoptotic process IEP Predicted GO
BP GO:0043066 negative regulation of apoptotic process IEP Predicted GO
BP GO:0043067 regulation of programmed cell death IEP Predicted GO
BP GO:0043069 negative regulation of programmed cell death IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
BP GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predicted GO
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
BP GO:0044403 symbiont process IEP Predicted GO
BP GO:0044419 interspecies interaction between organisms IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045861 negative regulation of proteolysis IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:0052547 regulation of peptidase activity IEP Predicted GO
BP GO:0052548 regulation of endopeptidase activity IEP Predicted GO
BP GO:0060548 negative regulation of cell death IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0071986 Ragulator complex IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predicted GO
BP GO:2000117 negative regulation of cysteine-type endopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 28 96
IPR000504 RRM_dom 108 171
No external refs found!