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Description : (at4g01560 : 228.0) maternal effect embryo arrest 49 (MEE49); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G63780.1); Has 893 Blast hits to 882 proteins in 227 species: Archae - 2; Bacteria - 0; Metazoa - 265; Fungi - 337; Plants - 121; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 456.0) & (original description: no original description)
Gene families : OG_42_0005331 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005331_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Porphyridium release: evm.model.contig_3540.5 | |
| Cluster | HCCA clusters: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At4g01560 | No alias | AT4g01560/F11O4_6 [Source:UniProtKB/TrEMBL;Acc:Q9M125] | 0.02 | Orthogroups_2024-Update | |
| Bradi1g51480 | No alias | Ribosomal RNA processing Brix domain protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.07G047700 | No alias | Ribosomal RNA processing Brix domain protein | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G027800.1 | No alias | pre-60S ribosomal subunit assembly factor *(RPF1) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002949 | tRNA threonylcarbamoyladenosine modification | IEP | Predicted GO |
| MF | GO:0005319 | lipid transporter activity | IEP | Predicted GO |
| BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
| BP | GO:0006869 | lipid transport | IEP | Predicted GO |
| BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
| BP | GO:0061024 | membrane organization | IEP | Predicted GO |
| BP | GO:0070525 | tRNA threonylcarbamoyladenosine metabolic process | IEP | Predicted GO |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Predicted GO |
| MF | GO:0120013 | intermembrane lipid transfer activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007109 | Brix | 116 | 282 |
| No external refs found! |