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  5. evm.model.contig_4402.6

evm.model.contig_4402.6


Description : no hits & (original description: no original description)


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4402.6
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
At1g05880 No alias Probable E3 ubiquitin-protein ligase ARI12... 0.02 Orthogroups_2024-Update
At5g63730 No alias Probable E3 ubiquitin-protein ligase ARI14... 0.02 Orthogroups_2024-Update
Bradi1g14430 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Brara.B03309.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.15G031100 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
LOC_Os04g41470 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_88915g0010 No alias (at1g65430 : 735.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.01 Orthogroups_2024-Update
Mp2g00810.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Potri.008G077100 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
Pp1s6_282V6 No alias protein ariadne- 0.02 Orthogroups_2024-Update
Sopen01g051460 No alias IBR domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 340 379
No external refs found!