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  5. evm.model.contig_4409.6

evm.model.contig_4409.6


Description : (at4g29890 : 106.0) choline monooxygenase, putative (CMO-like); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, iron ion binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Aromatic-ring-hydroxylating dioxygenase, alpha subunit (InterPro:IPR001663); Has 7402 Blast hits to 7400 proteins in 1015 species: Archae - 31; Bacteria - 4374; Metazoa - 10; Fungi - 153; Plants - 102; Viruses - 0; Other Eukaryotes - 2732 (source: NCBI BLink). & (o22553|chmo_betvu : 103.0) Choline monooxygenase, chloroplast precursor (EC 1.14.15.7) - Beta vulgaris (Sugar beet) & (reliability: 212.0) & (original description: no original description)


Gene families : OG_42_0007737 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4409.6
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G097970.8 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0044237 cellular metabolic process IEA InterProScan predictions
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR015879 Ring_hydroxy_dOase_asu_C_dom 250 291
IPR015879 Ring_hydroxy_dOase_asu_C_dom 320 423
IPR017941 Rieske_2Fe-2S 93 186
No external refs found!