- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at5g02320 : 122.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (q4jl76|myba2_orysa : 89.7) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 244.0) & (original description: no original description)
Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Porphyridium release: evm.model.contig_4410.19 | |
| Cluster | HCCA clusters: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_09539 | No alias | transcription factor myb44 | 0.02 | Orthogroups_2024-Update | |
| At4g37260 | No alias | MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7] | 0.02 | Orthogroups_2024-Update | |
| Bradi2g55303 | No alias | myb domain protein 98 | 0.02 | Orthogroups_2024-Update | |
| Brara.B03351.1 | No alias | MYB class-R2R3 subgroup-21 transcription factor | 0.02 | Orthogroups_2024-Update | |
| GRMZM5G803308 | No alias | myb domain protein 73 | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G052100 | No alias | myb domain protein 73 | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G085570.1 | No alias | MYB class-R2R3 subgroup-22/23 transcription factor | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G049880.1 | No alias | MYB class-R2R3 subgroup-22/23 transcription factor | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G025720.1 | No alias | MYB class-R2R3 transcription factor | 0.03 | Orthogroups_2024-Update | |
| Kfl00937_0030 | kfl00937_0030_v1.1 | (at3g09370 : 141.0) putative c-myb-like transcription... | 0.04 | Orthogroups_2024-Update | |
| LOC_Os01g74590 | No alias | MYB family transcription factor, putative, expressed | 0.01 | Orthogroups_2024-Update | |
| LOC_Os02g09480 | No alias | myb-like DNA-binding domain containing protein,... | 0.01 | Orthogroups_2024-Update | |
| LOC_Os08g34960 | No alias | MYB family transcription factor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_120049g0010 | No alias | (at3g50060 : 201.0) Encodes a member of the R2R3... | 0.01 | Orthogroups_2024-Update | |
| MA_89683g0010 | No alias | (at5g67300 : 191.0) Member of the R2R3 factor MYB gene... | 0.01 | Orthogroups_2024-Update | |
| Mp3g02830.1 | No alias | transcription factor (MYB) | 0.02 | Orthogroups_2024-Update | |
| Potri.003G123800 | No alias | Homeodomain-like protein | 0.01 | Orthogroups_2024-Update | |
| Potri.017G085200 | No alias | myb domain protein 105 | 0.01 | Orthogroups_2024-Update | |
| Seita.4G205800.1 | No alias | MYB class-R2R3 subgroup-22/23 transcription factor | 0.02 | Orthogroups_2024-Update | |
| Seita.9G054400.1 | No alias | MYB class-R2R3 transcription factor | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G146500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004832 | valine-tRNA ligase activity | IEP | Predicted GO |
| BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
| BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
| BP | GO:0008203 | cholesterol metabolic process | IEP | Predicted GO |
| BP | GO:0016042 | lipid catabolic process | IEP | Predicted GO |
| BP | GO:0016125 | sterol metabolic process | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
| BP | GO:1902652 | secondary alcohol metabolic process | IEP | Predicted GO |
| No external refs found! |